Preprocessing
=============

.. currentmodule:: brainlit.preprocessing


Image Processing
----------------

.. autoapifunction:: center
.. autoapifunction:: contrast_normalize
.. autoapifunction:: whiten
.. autoapifunction:: window_pad
.. autoapifunction:: undo_pad
.. autoapifunction:: vectorize_img
.. autoapifunction:: imagize_vector



Image Filters
-------------

.. autoapifunction:: gabor_filter



Segmentation Processing
----------------------

.. autoapifunction:: getLargestCC 
.. autoapifunction:: removeSmallCCs
.. autoapifunction:: label_points
.. autoapifunction:: compute_frags 
.. autoapifunction:: remove_somas
.. autoapifunction:: rename_states_consecutively